Inter simple sequence repeat analysis of genetic diversity and relationship in four egyptian flaxseed genotypes

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dc.contributor.author El Sayed A.
dc.contributor.author Ezzat, Shahira M
dc.contributor.author Mostafa S.
dc.contributor.author Zedan S.
dc.contributor.author Abdel-Sattar E.
dc.contributor.author El Tanbouly N.
dc.contributor.other Department of Pharmacognosy
dc.contributor.other College of Pharmacy
dc.contributor.other Cairo University
dc.contributor.other P.O. Box 11562
dc.contributor.other Cairo
dc.contributor.other 11562
dc.contributor.other Egypt; Department of Pharmacognosy
dc.contributor.other Faculty of Pharmacy
dc.contributor.other October University for Modern Science and Arts
dc.contributor.other P.O.Box 12566
dc.contributor.other 6th October
dc.contributor.other 12566
dc.contributor.other Egypt; Crops Research Department
dc.contributor.other Agricultural Research Center
dc.contributor.other Giza
dc.contributor.other Egypt
dc.date.accessioned 2020-01-09T20:40:56Z
dc.date.available 2020-01-09T20:40:56Z
dc.date.issued 2018
dc.identifier.issn 9748490
dc.identifier.other https://doi.org/10.4103/pr.pr_126_17
dc.identifier.other PubMed ID :
dc.identifier.uri https://t.ly/mb7Wg
dc.description Scopus
dc.description MSA Google Scholar
dc.description.abstract Background: Flaxseed is a highly important industrial and medicinal plant worldwide. Objective: To use inter simple sequence repeat (ISSR) technique for making unique fingerprint for the four newly produced genotypes of flax in Egypt. Materials and Methods: The genetic diversity among four promising Egyptian flax (Linum usitatissimum L.) genotypes was premeditated by means of polymerase chain reaction-based ISSR markers. The phenotypic variation among the four flax genotypes, namely, promising strains 533/39/5/3 (F1), S.402/3/3/7 (F2), S.421/3/6/4 (F3), and S.11 (F4) was studied during the two successive winter seasons of 2014/2015 and 2015/2016 in randomized complete block design through four replications. Results: The promising strain (F3) surpassed the other flax genotypes regarding seed yield/feddan, oil yield/feddan, and oil percentage. Twelve ISSR primers were used for the genetic examination yielding 139 loci, of which 31 were polymorphic. The middling number of amplified loci and the middling number of polymorphic loci per primer were 11.6 and 2.6, correspondingly, while the percent of loci polymorphism ranged from 0.0% to 58.0% with a middling of 21.4% crosswise all the flax genotypes. The more informative primers were GAC (GATA)4and (GATA)4GC, while the less informative were (AC)8T and (GT)8G. Unweighted pair group method with arithmetic mean derived dendrogram clearly discriminated the flax genotypes in three clusters. The Jaccard's similarity coefficient along with the genotypes ranged from 0.91 to 0.95. Conclusion: This study identified S. 421/3/6/4 (F3) strain to be the mainly assorted genotype and recommended its use in propagation programs and for upward mapping populations. Abbreviations Used: CTAB: N-cetyl-N,N,N-trimethylammonium bromide; EDTA: ethylenediaminetetraacetic acid; ISSR: Inter Simple Sequence Repeat; PCR: polymerase chain reaction; RAPDs: random amplified polymorphic DNAs; RCBD: Randomized Complete Block Design; UPGMA: Unweighted Pair Group Method with Arithmetic Mean; SSR: simple sequence repeat. � 2018 Pharmacognosy Research | Published by Wolters Kluwer - Medknow. en_US
dc.description.uri https://www.scimagojr.com/journalsearch.php?q=19700174941&tip=sid&clean=0
dc.language.iso English en_US
dc.publisher Medknow Publications en_US
dc.relation.ispartofseries Pharmacognosy Research
dc.relation.ispartofseries 10
dc.subject Cluster analysis en_US
dc.subject genotypes en_US
dc.subject linseed en_US
dc.subject molecular marker en_US
dc.subject polymorphism en_US
dc.subject molecular marker en_US
dc.subject vegetable oil en_US
dc.subject Article en_US
dc.subject cluster analysis en_US
dc.subject controlled study en_US
dc.subject Egyptian en_US
dc.subject flax en_US
dc.subject gene locus en_US
dc.subject genetic analysis en_US
dc.subject genetic variability en_US
dc.subject genotype en_US
dc.subject germplasm en_US
dc.subject inter simple sequence repeat en_US
dc.subject linseed en_US
dc.subject nonhuman en_US
dc.subject phenotype en_US
dc.subject phylogenetic tree en_US
dc.subject plant seed en_US
dc.subject polymerase chain reaction en_US
dc.subject seed yield en_US
dc.subject strain difference en_US
dc.subject winter en_US
dc.title Inter simple sequence repeat analysis of genetic diversity and relationship in four egyptian flaxseed genotypes en_US
dc.type Article en_US
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dcterms.source Scopus
dc.identifier.doi https://doi.org/10.4103/pr.pr_126_17
dc.identifier.doi PubMed ID :
dc.Affiliation October University for modern sciences and Arts (MSA)


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